This is a first of a number of posts based upon discussions I had while at the Collaborations Workshop 2013 (#CollabW13 on twitter) in Oxford, UK. During one of the sessions I described a simple technique that I try and use to increase the sustainability, reproducibility and releasability of code that I write, data I […]
In honour of the bicentenary of John Snow’s birth – and because I was asked to by someone via email – I have now released my digitisation of John Snow’s Cholera data in a few other formats: KML and as Google Fusion Tables. To save you reading my previous blog posts on the subject, I’ll […]
I recently did a presentation entitled Sustainable Software and Reproducible Research in Remote Sensing at the Wavelength 2013 conference. The slides are available at SpeakerDeck, and shown below. https://speakerdeck.com/robintw/software-sustainability-and-reproducible-research-in-remote-sensing The rest of this page is a rather rough categorised list of various links and resources that may be useful to you after seeing the presentation (either […]
Updated 6th Jan 2020: This post has been updated to fix the code example and the link to the Landsat shapefile download. As part of some work I was doing for my PhD, I needed to automatically find what Landsat scene path and row would contain a pixel with a certain latitude/longitude co-ordinate (this was […]
I’m a big fan of Matt Might’s blog, and thought I’d implement one of his tips for blogging as an academic – namely Reply to Public. I’ve had a number of emails from Py6S users asking me questions about how to atmospherically-correct entire satellite images with Py6S – so I thought ‘d respond online, so that […]
Version 1.2 of Py6S has recently been released (including a couple of bug fix releases, taking the most recent version to v1.2.2), and the major new feature in this version is the ability to use any spectrum as the ground reflectance for a model run. Previously, users were restricted to using the built-in 6S ground […]
Another exciting update for this new year: my first academic journal paper has been published! It’s called Py6S: A Python interface to the 6S Radiative Transfer Model, and is published in Computers and Geosciences. If you’re reading this from a university with a subscription to Computers and Geosciences then you can read it at ScienceDirect – […]
I’ve just signed the Science Code Manifesto because I firmly believe in what it says. Ok well, that probably doesn’t tell you much – generally I tend to believe in things that I sign – but I’d like to tell you why I signed it, and why I think it’s really important. A lot of […]
As you might know from some of my previous posts, I’m a big fan of making my scientific work reproducible. My main reasons for being so keen on this are: Reproducibility is key to science – if it can’t be reproduced then it can not be verified (that is, the experiment can’t be tried again to […]
Recently I was shocked to find that there didn’t seem to be a simple tool which would convert BibTeX files to COINS metadata span tags – so I wrote one! That sentence probably made no sense to you – so lets go through it in a bit more depth. I use LaTeX to write all […]